Subject ID | Time-point | Pandemic H1N1 HAI Titer | Seasonal H1N1 HAI Titer | CD4+ (cells/mm3) | Days on ART | Copies HIV DNA/million PBMC | Plasma RNA (copies/mL) | # HIV DNA Seq. | Divergence median (95% CI) | Diversity median (95% CI) | # Mono-typic sequences | % Mono-typic |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | Entry | 5 | 5 | 140 | 125 | 358 | 112 | 20 | .080 (.047 to 113) | .052 (.007 to .097) | 2 | 10 |
Week 3 | 20 | 5 | – | 206 | 38.4 | 36 | .08 (.060 to .100) | .056 (.019 to .093) | 10 | 28 | ||
2 | Entry | 10 | 10 | 337 | 77 | 22 | ND | 18 | .023 (.020 to .027) | .032 (.019 to .045) | 3 | 17 |
Week 3 | 20 | 10 | – | 17 | ND | 23 | .017 (.014 to .023) | .026 (.014 to .038) | 7 | 30 | ||
3 | Entry | 10 | 10 | 475 | 386 a | 398 | NA | 21 | .029 (.018 to .040) | .029 (.012 to .046) | 2 | 10 |
Week 3 | 10 | 5 | – | 614 | NA | 19 | .029 (.010 to .048) | .034 (.012 to .056) | 4 | 21 | ||
4 | Entry | 5 | 10 | 623 | 882 a | 123 | NA | 21 | .019 (.009 to .029) | .020 (−.001 to .041) | 10 | 48 |
Week 3 | 80 | 10 | – | 157 | NA | 20 | .020 (.009 to .031) | .019 (.006 to .032) | 6 | 30 | ||
5 | Entry | 5 | 40 | 1383 | 57 | 3 | NA | 22 | .024 (.022 to .026) | .019 (.009 to .029) | 10 | 45 |
Week 3 | 160 | 20 | – | 10 | NA | 20 | .024 (.017 to .031) | .019 (.010 to .028) | 8 | 40 | ||
6 | Entry | 40 | 40 | 400 | 302 a | 24 | <8 | 28 | .017 (.006 to .028) | .017 ( to .003.037) | 7 | 25 |
Week 3 | 320 | 40 | – | 6 | ND | 24 | .017 (.007 to .027) | .02 (.003 to .037) | 8 | 33 | ||
7 | Entry | 80 | 40 | 608 | 2494 a | 70 | ND | 19 | .016 (.010 to .022) | .015 (.004 to .026) | 7 | 37 |
Week 3 | 160 | 40 | – | 3 | ND | 20 | .016 (.013 to .019) | .015 (.007 to .023) | 6 | 30 | ||
8 | Entry | 20 | 20 | 381 | 106 | 52 | 11.4 | 24 | .054 (.023 to .085) | .037 (.004 to .070) | 8 | 33 |
Week 3 | 160 | 20 | – | 57 | <8 | 23 | .052 (.034 to .070) | .042 (.010 to .074) | 6 | 26 | ||
9 | Entry | 20 | 40 | 501 | 56 | 122 | ND | 21 | .045 (.013 to .077) | .045 (.020 to .070) | 8 | 40 |
Week 3 | 160 | 20 | – | 186 | ND | 20 | .049 (.027 to .071) | .043 (.019 to .067) | 8 | 40 | ||
10 | Entry | 80 | 20 | 712 | 85 | 153 | NA | 20 | .050 (.016 to .084) | .059 (.022 to .096) | 5 | 25 |
Week 3 | 1280 | 20 | – | 26 | NA | 24 | .052 (.018 to .086) | .064 (.027 to .101) | 4 | 17 |