Skip to main content

Table 1 Examples of unintegrated DNAs in virus-infected cells and their fates

From: Distribution and fate of HIV-1 unintegrated DNA species: a comprehensive update

Virus

Cell line

Cell number

hpi (hours per infection)

Methods

Consequence

Ref.

Avian sarcoma virus

QT-6

 

5 hpi

 

Closed circular DNA

[34]

MLV

NIH 3T3, TE671, ARPE-19

1 × 106 cells

2 hpi

qPCR

2-LTR

[16]

HIV-1

MT-2

5 × 105 cells

2 hpi

PCR and Southern hybridization

1-LTR

[31]

12 hpi

2-LTR

Monocyte

1 × 106 cells

2 hpi

PCR and Southern hybridization

1-LTR

12 hpi

2-LTR

Macrophage

3 × 105 cells

4 dpi

qPCR

2-LTR

30–35 copies/100cells

[45]

21 dpi

 

6 copies/100cells

CD4+ T lymphocytes

3 × 105 cells

4 dpi

2-LTR

11 copies/100cells

14 dpi

X

Jurkat

1 × 107

3 dpt

2-LTR

8.97%

[36]

1-LTR

46.21%

293T

 

2-LTR

5.42%

1-LTR

40.16%

 

SupT1 (lymphoid cells)

5 × 106 cells

15 hpi

2-LTR

0.01 copy/cell

[46]

12 hpi

40 copies/cells

  1. dpt days post-transduction, dpi days post infection