|
Patient demographic details
|
HIV-1 Co-receptor Tropism
|
|---|
|
No
|
Patient ID
|
Age
|
Sex
|
Time since sero-diagnosis (months)
|
CD4 Count (cells/mm
3
)
|
Disease Stage
|
WebPSSM (C-PSSM)
|
Geno2pheno
|
(ds)Kernel
|
| | | | | | | |
Score
|
Tropism
| | |
|
1.
|
SJNAHS01
|
33
|
M
|
43
|
223
|
2nd
|
-29.39
|
R5
|
R5
|
R5
|
|
2.
|
SJNAHS02
|
53
|
F
|
4
|
247
|
2nd
|
-29.97
|
R5
|
R5
|
R5
|
|
3.
|
SJNAHS03
|
30
|
M
|
46
|
173
|
2nd
|
-23.28
|
R5
|
R5
|
R5
|
|
4.
|
SJNAHS04
|
37
|
M
|
63
|
538
|
1st
|
-16.09
|
X4
|
R5
|
R5
|
|
5.
|
SJNAHS06
|
36
|
F
|
1
|
122
|
3rd
|
-23.32
|
R5
|
R5
|
R5
|
|
6.
|
SJNAHS07
|
26
|
F
|
1
|
384
|
1st
|
-29.97
|
R5
|
R5
|
R5
|
|
7.
|
SJNAHS09
|
38
|
F
|
1
|
356
|
3rd
|
-25.74
|
R5
|
R5
|
R5
|
|
8.
|
SJNAHS10
|
38
|
M
|
105
|
438
|
3rd
|
-25.74
|
R5
|
R5
|
R5
|
|
9.
|
SJNAHS11
|
26
|
M
|
15
|
594
|
1st
|
-29.39
|
R5
|
R5
|
R5
|
|
10.
|
SJNAHS12
|
38
|
M
|
22
|
59
|
1st
|
-25.74
|
R5
|
R5
|
R5
|
|
11.
|
SJNAHS13
|
36
|
M
|
130
|
77
|
1st
|
-19.35
|
X4
|
X4
|
R5
|
|
12.
|
SJNAHS16
|
39
|
M
|
1
|
13
|
4th
|
-29.08
|
R5
|
R5
|
R5
|
|
13.
|
SJNAHS17
|
36
|
F
|
1
|
75
|
1st
|
-29.05
|
R5
|
R5
|
R5
|
|
14.
|
SJNAHS18
|
60
|
M
|
1
|
99
|
4th
|
-22.37
|
R5
|
R5
|
R5
|
|
15.
|
SJNAHS19
|
40
|
M
|
2
|
200
|
1st
|
-22.37
|
R5
|
R5
|
R5
|
- Patient demographic characteristics and predicted co-receptor tropism in the South Indian cohort. CD4 count represents the value at the time of study. Co-receptor tropism was detected using C-PSSM, Geno2pheno and (ds)Kernel method. In C-PSSM a score of above -21.64 was considered predictive of X4-tropism. Disease stage according to WHO classification has been mentioned.
